miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Brassica oleracea var. alboglabra, Brassica oleracea



ABOUT THIS RECORD

ID: MNEST008655
species: Brassica oleracea
miRNA family: MIR774
source: miRNEST

Taxonomy by NCBI:
Brassica oleracea Brassica Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGAGATGAAGATTTGGATTGG

miRNA*
AATCGCTTTCTCCGTCTTTCT

mismatches: 5
bulges: 0

View larger
pre-miRNA
GGAGGAAGCTCATTAGGAATCTAATCGCTTTCTCCGTCTTTCTTTGAGGTGATTGGCTGTGAGCTATGCGATTATGTCAACTAGAGATGAAGATTTGGAT
TGG
AAACTGAGGAGTTTCAGGA


dot-bracket secondary structure
....(((((((.((((...(((((((....(((.(((((((..((((.((((((((((...))))....)))))).))))..))))))).)))....)))
)))
)..)))).)))))))....



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|Q9ZQ34|Y2433_ARATH: 0.000001

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;